Tool name | Novoalign |
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URL | http://www.novocraft.com/main/index.php |
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Important features | 1. Alignment tool for aligning short sequences against an indexed set of reference sequences.
2. Aligning Illumina single-end and paired-end reads.
3. Gapped alignment on single-end reads and paired-end reads
4. Single pass alignment for Bisulphite treated DNA. |
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Citations | |
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Year of publication | Not available |
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Rank by usage frequency | 100 |
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Comments | |
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Function | RNA seq alignment, ChIP seq analysis |
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Category | Downloadable |
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License | |
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Status | |
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Input file format | FASTA, FASTQ |
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Output file format | SAM and native output formats |
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Operating system | Linux/Unix 32/64bit |
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Operating language | C++ |
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Platform | Illumina/Solexa, ABI SOLiD |
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Maintained by | Novocraft Technologies Sdn. Bhd. Kuala Lumpur, Malaysia
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Downloadable file format | |
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Submission file format | |
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